{"id":11120,"date":"2022-04-01T15:17:11","date_gmt":"2022-04-01T13:17:11","guid":{"rendered":"https:\/\/www.sciencefocus.com\/?p=115962"},"modified":"2022-04-01T15:36:11","modified_gmt":"2022-04-01T13:36:11","slug":"complete-human-genome-sequence-reveals-new-genetic-variants-linked-to-disease","status":"publish","type":"rss_feed","link":"https:\/\/c01.purpledshub.com\/bbcsciencefocus\/rss_feed\/complete-human-genome-sequence-reveals-new-genetic-variants-linked-to-disease\/","title":{"rendered":"Complete human genome sequence reveals new genetic variants linked to disease"},"content":{"rendered":"<p class=\"rssexcerpt\"><\/p><p class=\"rssauthor\">By Amy Barrett\n                \t\t<\/p><p class=\"rssbyline\">Published: Friday, 01 April 2022 at 12:00 am<\/p><hr class=\"no-tts wp-block-separator\"\/><?xml version=\"1.0\" encoding=\"UTF-8\" standalone=\"yes\"?>\n<!DOCTYPE html PUBLIC \"-\/\/W3C\/\/DTD HTML 4.0 Transitional\/\/EN\" \"http:\/\/www.w3.org\/TR\/REC-html40\/loose.dtd\">\n<html><body><p>For the first time, scientists have been able to sequence the complete human genome, revealing never-before-seen regions of <a href=\"&quot;https:\/\/www.sciencefocus.com\/the-human-body\/dna\/&quot;\">DNA<\/a> that code for things like muscular dystrophy, some cancers, and even our big brains.<\/p>\n<p>When the human genome project completed its sequencing in 2003, it offered an accurate picture of 92 per cent of our genome. The remaining 8 per cent was too complex for the technology of the time to map, and since then researchers have been working to provide a full picture of the DNA blueprint that makes us human.<\/p>\n<p>The team behind the discovery \u2013 named the Telomere-to-Telomere Consortium (T2T) \u2013 say the newly mapped areas of our genome could lead to innovative treatments and greater understanding of human variation.<\/p>\n<h2>What is the human genome?<\/h2>\n<p>The human genome is the entirety of a person\u2019s DNA. It includes around 21,000 genes, which, if removed from a single cell and stretched out, would <a href=\"&quot;https:\/\/www.sciencefocus.com\/the-human-body\/how-long-is-your-dna\/&quot;\">form a strand around 2 metres long<\/a>. These genes are segmented, and are often found grouped in 46 bundles, which are known as chromosomes.<\/p>\n<div class=\"&quot;image-handler__container\" image-handler__container--full=\"\" style=\"&quot;padding-bottom:\" calc=\"\"> <picture><source media=\"&quot;(max-width:\" data-srcset=\"&quot;https:\/\/images.immediate.co.uk\/production\/volatile\/sites\/4\/2022\/04\/chromosome-bee31c8.jpg?webp=true&amp;quality=90&amp;resize=300%2C211,\" https:=\"\" type=\"&quot;image\/webp&quot;\"><source media=\"&quot;(max-width:\" data-srcset=\"&quot;https:\/\/images.immediate.co.uk\/production\/volatile\/sites\/4\/2022\/04\/chromosome-bee31c8.jpg?quality=90&amp;resize=300%2C211,\" https:=\"\" type=\"&quot;image\/jpeg&quot;\"><source media=\"&quot;(max-width:\" data-srcset=\"&quot;https:\/\/images.immediate.co.uk\/production\/volatile\/sites\/4\/2022\/04\/chromosome-bee31c8.jpg?webp=true&amp;quality=90&amp;resize=355%2C249,\" https:=\"\" type=\"&quot;image\/webp&quot;\"><source media=\"&quot;(max-width:\" data-srcset=\"&quot;https:\/\/images.immediate.co.uk\/production\/volatile\/sites\/4\/2022\/04\/chromosome-bee31c8.jpg?quality=90&amp;resize=355%2C249,\" https:=\"\" type=\"&quot;image\/jpeg&quot;\"><source media=\"&quot;(max-width:\" data-srcset=\"&quot;https:\/\/images.immediate.co.uk\/production\/volatile\/sites\/4\/2022\/04\/chromosome-bee31c8.jpg?webp=true&amp;quality=90&amp;resize=405%2C284,\" https:=\"\" type=\"&quot;image\/webp&quot;\"><source media=\"&quot;(max-width:\" data-srcset=\"&quot;https:\/\/images.immediate.co.uk\/production\/volatile\/sites\/4\/2022\/04\/chromosome-bee31c8.jpg?quality=90&amp;resize=405%2C284,\" https:=\"\" type=\"&quot;image\/jpeg&quot;\"><source media=\"&quot;(max-width:\" data-srcset=\"&quot;https:\/\/images.immediate.co.uk\/production\/volatile\/sites\/4\/2022\/04\/chromosome-bee31c8.jpg?webp=true&amp;quality=90&amp;resize=554%2C389,\" https:=\"\" type=\"&quot;image\/webp&quot;\"><source media=\"&quot;(max-width:\" data-srcset=\"&quot;https:\/\/images.immediate.co.uk\/production\/volatile\/sites\/4\/2022\/04\/chromosome-bee31c8.jpg?quality=90&amp;resize=554%2C389,\" https:=\"\" type=\"&quot;image\/jpeg&quot;\"><source media=\"&quot;(min-width:\" data-srcset=\"&quot;https:\/\/images.immediate.co.uk\/production\/volatile\/sites\/4\/2022\/04\/chromosome-bee31c8.jpg?webp=true&amp;quality=90&amp;resize=620%2C435&quot;\" type=\"&quot;image\/webp&quot;\"><source media=\"&quot;(min-width:\" data-srcset=\"&quot;https:\/\/images.immediate.co.uk\/production\/volatile\/sites\/4\/2022\/04\/chromosome-bee31c8.jpg?quality=90&amp;resize=620%2C435&quot;\" type=\"&quot;image\/jpeg&quot;\"><source media=\"&quot;(min-width:\" data-srcset=\"&quot;https:\/\/images.immediate.co.uk\/production\/volatile\/sites\/4\/2022\/04\/chromosome-bee31c8.jpg?webp=true&amp;quality=90&amp;resize=408%2C286,\" https:=\"\" type=\"&quot;image\/webp&quot;\"><source media=\"&quot;(min-width:\" data-srcset=\"&quot;https:\/\/images.immediate.co.uk\/production\/volatile\/sites\/4\/2022\/04\/chromosome-bee31c8.jpg?quality=90&amp;resize=408%2C286,\" https:=\"\" type=\"&quot;image\/jpeg&quot;\"><source media=\"&quot;(min-width:\" data-srcset=\"&quot;https:\/\/images.immediate.co.uk\/production\/volatile\/sites\/4\/2022\/04\/chromosome-bee31c8.jpg?webp=true&amp;quality=90&amp;resize=556%2C390,\" https:=\"\" type=\"&quot;image\/webp&quot;\"><source media=\"&quot;(min-width:\" data-srcset=\"&quot;https:\/\/images.immediate.co.uk\/production\/volatile\/sites\/4\/2022\/04\/chromosome-bee31c8.jpg?quality=90&amp;resize=556%2C390,\" https:=\"\" type=\"&quot;image\/jpeg&quot;\"><img class=\"&quot;wp-image-116043\" align=\"\" size-full=\"\" image-handler__image=\"\" image-handler__image--full=\"\" no-wrap=\"\" js-lazyload=\"\" data-src=\"&quot;https:\/\/images.immediate.co.uk\/production\/volatile\/sites\/4\/2022\/04\/chromosome-bee31c8.jpg?quality=90&amp;resize=620%2C435&quot;\" width=\"&quot;620&quot;\" height=\"&quot;435&quot;\" alt=\"&quot;&quot;\" title=\"&quot;&quot;\"\/><\/source><\/source><\/source><\/source><\/source><\/source><\/source><\/source><\/source><\/source><\/source><\/source><\/source><\/source><\/picture><\/div><div class=\"&quot;caption-hold&quot;\"><figcaption class=\"&quot;wp-caption-text&quot;\"><span class=\"&quot;caption-copy&quot;\"><i class=\"&quot;icon-arrow\" icon-camera-circle=\"\"\/> Diagram of a chromosome, courtesy of National Human Genome Research Institute, genome.gov<\/span><\/figcaption><span class=\"&quot;im-image-caption&quot;\"\/><\/div>\n<p>\u201cThe genome is the complete book of instructions for a species, and every species has its own genome. It\u2019s basically the blueprint that tells cells how and when to create an individual of that species,\u201d said <a href=\"\/\/www.migalab.com\/people&quot;\" target=\"&quot;_blank&quot;\" rel=\"&quot;noopener&quot; noopener noreferrer\">Dr Karen Miga<\/a>, assistant professor of biomolecular engineering at UC Santa Cruz.<\/p>\n<p>Along with <a href=\"\/\/www.genome.gov\/staff\/Adam-M-Phillippy-PhD&quot;\" target=\"&quot;_blank&quot;\" rel=\"&quot;noopener&quot; noopener noreferrer\">Dr Adam Phillippy<\/a> of the National Human Genome Research Institute, Miga lead an international team of scientists in the search for the missing sections of the human genome.<\/p>\n<p>\u201c[When the first genome was sequenced in 2003] we had the book, but there were whole chapters missing. Over the years we\u2019ve added pages here and there, unscrambling some text or correcting some errors. But now, we go from page one to the final page of the book. Having this will help us better understand how we form, as an organism, and how we vary among other humans and other species,\u201d said Miga.<\/p>\n<h2>What was found in our missing DNA?<\/h2>\n<p>The 8 per cent hidden represented a huge gap in medical and genomic knowledge. \u201cOn a world map, 8 per cent is about the size of Africa, so almost an entire continent was missing,\u201d said Miga.<\/p>\n<p>Among the new information sequenced were two crucial areas of our chromosomes: the telomeres and the centromeres.<\/p>\n<p>Telomeres are small caps found at the end of our chromosomes. It is these areas of our chromosomes that shorten as we age. Some research has shown that people who have shorter telomeres than is normal for their age are at increased risk of diseases of old age, and die sooner than people with longer ones. Studies suggest the <a href=\"&quot;https:\/\/www.sciencefocus.com\/the-human-body\/the-race-to-stop-ageing-10-breakthroughs-that-will-help-us-grow-old-healthily\/#:~:text=4-,Telomerase,-Telomeres%20(blue)%20on&quot;\">lengthening of telomeres is one possible way to slow down ageing<\/a>.<\/p>\n<p><strong>Read more about our DNA:<\/strong><\/p>\n<ul><li><a href=\"&quot;https:\/\/www.sciencefocus.com\/the-human-body\/beyond-dna-how-proteins-let-us-get-up-close-and-personal-to-our-ancient-relatives\/&quot;\">Beyond DNA: How proteins let us get up close and personal to our ancient relatives<\/a><\/li>\n<li><a href=\"&quot;https:\/\/www.sciencefocus.com\/the-human-body\/genes-mental-health\/&quot;\">A neuroscientist explains how your genes affect your mental health<\/a><\/li>\n<\/ul><p>The centromeres are the structures in the middle of the chromosome. This area is important during cell division, as it\u2019s at this site of constriction that proteins attach and split up the DNA so it can be shared between the two new cells.<\/p>\n<p>\u201cProblems or error in the centromeres is something we see in cancers, in ageing and in infertility,\u201d said Miga.<\/p>\n<p>The new genome, called T2T-CHM13, revealed nearly 2,000 candidate genes that researchers can now study further.<\/p>\n<p>Some sections have already been identified by the team to contain genes linked to our immune response, that help us to survive infection and plagues, said <a href=\"\/\/eichlerlab.gs.washington.edu\/evan.html&quot;\" target=\"&quot;_blank&quot;\" rel=\"&quot;noopener&quot; noopener noreferrer\">Prof Evan Eichler<\/a>, of the Eichler Lab in the department of genome sciences, University of Washington.\u00a0They also found important areas that can predict how a person might respond to certain drugs and treatments, said Eichler.<\/p>\n<p>\u201cSome of these [new findings] are the genes that make us uniquely human \u2013 half of the genes thought to be responsible for our bigger frontal lobes, making our brain bigger than other primates, are in these newly sequenced regions,\u201d said Eichler.<\/p>\n<p>Once sequenced, the team compared their new human genome to other, existing samples of DNA, and over one million new genetic variants, many of which had never seen before.<\/p>\n<p>\u201cWithin previously unresolved regions of the genome, we identified hundreds\u00a0of thousands of variants\u2026 a promising opportunity for evolutionary and biomedical discovery,\u201d wrote the researchers.<\/p>\n<div class=\"&quot;image-handler__container\" image-handler__container--full=\"\" style=\"&quot;padding-bottom:\" calc=\"\"> <picture><source media=\"&quot;(max-width:\" data-srcset=\"&quot;https:\/\/images.immediate.co.uk\/production\/volatile\/sites\/4\/2022\/04\/GettyImages-1131369293-c5a493c.jpg?webp=true&amp;quality=90&amp;resize=300%2C229,\" https:=\"\" type=\"&quot;image\/webp&quot;\"><source media=\"&quot;(max-width:\" data-srcset=\"&quot;https:\/\/images.immediate.co.uk\/production\/volatile\/sites\/4\/2022\/04\/GettyImages-1131369293-c5a493c.jpg?quality=90&amp;resize=300%2C229,\" https:=\"\" type=\"&quot;image\/jpeg&quot;\"><source media=\"&quot;(max-width:\" data-srcset=\"&quot;https:\/\/images.immediate.co.uk\/production\/volatile\/sites\/4\/2022\/04\/GettyImages-1131369293-c5a493c.jpg?webp=true&amp;quality=90&amp;resize=355%2C271,\" https:=\"\" type=\"&quot;image\/webp&quot;\"><source media=\"&quot;(max-width:\" data-srcset=\"&quot;https:\/\/images.immediate.co.uk\/production\/volatile\/sites\/4\/2022\/04\/GettyImages-1131369293-c5a493c.jpg?quality=90&amp;resize=355%2C271,\" https:=\"\" type=\"&quot;image\/jpeg&quot;\"><source media=\"&quot;(max-width:\" data-srcset=\"&quot;https:\/\/images.immediate.co.uk\/production\/volatile\/sites\/4\/2022\/04\/GettyImages-1131369293-c5a493c.jpg?webp=true&amp;quality=90&amp;resize=405%2C309,\" https:=\"\" type=\"&quot;image\/webp&quot;\"><source media=\"&quot;(max-width:\" data-srcset=\"&quot;https:\/\/images.immediate.co.uk\/production\/volatile\/sites\/4\/2022\/04\/GettyImages-1131369293-c5a493c.jpg?quality=90&amp;resize=405%2C309,\" https:=\"\" type=\"&quot;image\/jpeg&quot;\"><source media=\"&quot;(max-width:\" data-srcset=\"&quot;https:\/\/images.immediate.co.uk\/production\/volatile\/sites\/4\/2022\/04\/GettyImages-1131369293-c5a493c.jpg?webp=true&amp;quality=90&amp;resize=554%2C423,\" https:=\"\" type=\"&quot;image\/webp&quot;\"><source media=\"&quot;(max-width:\" data-srcset=\"&quot;https:\/\/images.immediate.co.uk\/production\/volatile\/sites\/4\/2022\/04\/GettyImages-1131369293-c5a493c.jpg?quality=90&amp;resize=554%2C423,\" https:=\"\" type=\"&quot;image\/jpeg&quot;\"><source media=\"&quot;(min-width:\" data-srcset=\"&quot;https:\/\/images.immediate.co.uk\/production\/volatile\/sites\/4\/2022\/04\/GettyImages-1131369293-c5a493c.jpg?webp=true&amp;quality=90&amp;resize=620%2C474&quot;\" type=\"&quot;image\/webp&quot;\"><source media=\"&quot;(min-width:\" data-srcset=\"&quot;https:\/\/images.immediate.co.uk\/production\/volatile\/sites\/4\/2022\/04\/GettyImages-1131369293-c5a493c.jpg?quality=90&amp;resize=620%2C474&quot;\" type=\"&quot;image\/jpeg&quot;\"><source media=\"&quot;(min-width:\" data-srcset=\"&quot;https:\/\/images.immediate.co.uk\/production\/volatile\/sites\/4\/2022\/04\/GettyImages-1131369293-c5a493c.jpg?webp=true&amp;quality=90&amp;resize=408%2C312,\" https:=\"\" type=\"&quot;image\/webp&quot;\"><source media=\"&quot;(min-width:\" data-srcset=\"&quot;https:\/\/images.immediate.co.uk\/production\/volatile\/sites\/4\/2022\/04\/GettyImages-1131369293-c5a493c.jpg?quality=90&amp;resize=408%2C312,\" https:=\"\" type=\"&quot;image\/jpeg&quot;\"><source media=\"&quot;(min-width:\" data-srcset=\"&quot;https:\/\/images.immediate.co.uk\/production\/volatile\/sites\/4\/2022\/04\/GettyImages-1131369293-c5a493c.jpg?webp=true&amp;quality=90&amp;resize=556%2C425,\" https:=\"\" type=\"&quot;image\/webp&quot;\"><source media=\"&quot;(min-width:\" data-srcset=\"&quot;https:\/\/images.immediate.co.uk\/production\/volatile\/sites\/4\/2022\/04\/GettyImages-1131369293-c5a493c.jpg?quality=90&amp;resize=556%2C425,\" https:=\"\" type=\"&quot;image\/jpeg&quot;\"><img class=\"&quot;wp-image-116046\" align=\"\" size-full=\"\" image-handler__image=\"\" image-handler__image--full=\"\" no-wrap=\"\" js-lazyload=\"\" data-src=\"&quot;https:\/\/images.immediate.co.uk\/production\/volatile\/sites\/4\/2022\/04\/GettyImages-1131369293-c5a493c.jpg?quality=90&amp;resize=620%2C474&quot;\" width=\"&quot;620&quot;\" height=\"&quot;473&quot;\" alt=\"&quot;&quot;\" title=\"&quot;&quot;\"\/><\/source><\/source><\/source><\/source><\/source><\/source><\/source><\/source><\/source><\/source><\/source><\/source><\/source><\/source><\/picture><\/div><div class=\"&quot;caption-hold&quot;\"><figcaption class=\"&quot;wp-caption-text&quot;\"><span class=\"&quot;caption-copy&quot;\"><i class=\"&quot;icon-arrow\" icon-camera-circle=\"\"\/> The DNA sample used to map the full human genome was collected 20 years ago \u00a9 Getty Images<\/span><\/figcaption><span class=\"&quot;im-image-caption&quot;\"\/><\/div>\n<p>Genetic variants are already being used to aid treatments for some conditions, for example to target specific types of breast cancers with specialised therapies, and it\u2019s thought that the new genome map will only bring more genetically linked diseases to light.<\/p>\n<p>\u201cWe\u2019re already seeing some [genome-specific treatments], but I expect in my young son\u2019s lifetime we\u2019ll see more and more as we learn new things about the role of genetic variants,\u201d said <a href=\"\/\/schatz-lab.org\/&quot;\" target=\"&quot;_blank&quot;\" rel=\"&quot;noopener&quot; noopener noreferrer\">Prof Michael Schatz<\/a>, the co-lead for T2T\u2019s variance team.<\/p>\n<p>\u201cWe\u2019re finding variants that are only detectable using these new technologies. Are these causal [in relation to diseases]? We can\u2019t say that. But the fact there is an entire class of variants that we haven\u2019t been able to see before, and it\u2019s very exciting to me,\u201d said Schatz.<\/p>\n<h2>Whose DNA was used in the new human genome project?<\/h2>\n<p>The genome used in the research \u201crepresents no person that ever lived\u201d, Phillippy said. It came from a special cell created when a sperm and joined an empty egg. Unlike normal cells that come from a union of sperm and egg, which contain half the DNA of the mother and half of the father, this specialised cell contained only the sperm\u2019s genetic information. It was collected over 20 years ago, and the donors remain anonymous.<\/p><\/body><\/html>\n<hr class=\"no-tts wp-block-separator\"\/>","protected":false},"excerpt":{"rendered":"<p>By Amy Barrett Published: Friday, 01 April 2022 at 12:00 am For the first time, scientists have been able to sequence the complete human genome, revealing never-before-seen regions of DNA that code for things like muscular dystrophy, some cancers, and even our big brains. When the human genome project completed its sequencing in 2003, it [&hellip;]<\/p>\n","protected":false},"author":24,"featured_media":11121,"template":"","categories":[1],"acf":{"readingTimeMinutes":"5"},"uagb_featured_image_src":{"full":["https:\/\/c01.purpledshub.com\/uploads\/sites\/42\/2022\/04\/complete-human-genome-sequence-reveals-new-genetic-variants-linked-to-disease.jpg",1200,798,false],"thumbnail":["https:\/\/c01.purpledshub.com\/uploads\/sites\/42\/2022\/04\/complete-human-genome-sequence-reveals-new-genetic-variants-linked-to-disease-150x150.jpg",150,150,true],"medium":["https:\/\/c01.purpledshub.com\/uploads\/sites\/42\/2022\/04\/complete-human-genome-sequence-reveals-new-genetic-variants-linked-to-disease-300x200.jpg",300,200,true],"medium_large":["https:\/\/c01.purpledshub.com\/uploads\/sites\/42\/2022\/04\/complete-human-genome-sequence-reveals-new-genetic-variants-linked-to-disease-768x511.jpg",768,511,true],"large":["https:\/\/c01.purpledshub.com\/uploads\/sites\/42\/2022\/04\/complete-human-genome-sequence-reveals-new-genetic-variants-linked-to-disease-1024x681.jpg",800,532,true],"1536x1536":["https:\/\/c01.purpledshub.com\/uploads\/sites\/42\/2022\/04\/complete-human-genome-sequence-reveals-new-genetic-variants-linked-to-disease.jpg",1200,798,false],"2048x2048":["https:\/\/c01.purpledshub.com\/uploads\/sites\/42\/2022\/04\/complete-human-genome-sequence-reveals-new-genetic-variants-linked-to-disease.jpg",1200,798,false]},"uagb_author_info":{"display_name":"importmanagerhub@sprylab.com","author_link":"https:\/\/c01.purpledshub.com\/bbcsciencefocus\/author\/importmanagerhubsprylab-com\/"},"uagb_comment_info":0,"uagb_excerpt":"By Amy Barrett Published: Friday, 01 April 2022 at 12:00 am For the first time, scientists have been able to sequence the complete human genome, revealing never-before-seen regions of DNA that code for things like muscular dystrophy, some cancers, and even our big brains. When the human genome project completed its sequencing in 2003, it&hellip;","_links":{"self":[{"href":"https:\/\/c01.purpledshub.com\/bbcsciencefocus\/wp-json\/wp\/v2\/rss_feed\/11120"}],"collection":[{"href":"https:\/\/c01.purpledshub.com\/bbcsciencefocus\/wp-json\/wp\/v2\/rss_feed"}],"about":[{"href":"https:\/\/c01.purpledshub.com\/bbcsciencefocus\/wp-json\/wp\/v2\/types\/rss_feed"}],"author":[{"embeddable":true,"href":"https:\/\/c01.purpledshub.com\/bbcsciencefocus\/wp-json\/wp\/v2\/users\/24"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/c01.purpledshub.com\/bbcsciencefocus\/wp-json\/wp\/v2\/media\/11121"}],"wp:attachment":[{"href":"https:\/\/c01.purpledshub.com\/bbcsciencefocus\/wp-json\/wp\/v2\/media?parent=11120"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/c01.purpledshub.com\/bbcsciencefocus\/wp-json\/wp\/v2\/categories?post=11120"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}